Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015934762.1_cds_XP_016480773.1_72177
CDS Infomation

[gene=LOC107801882] [db_xref=GeneID:107801882] [protein=cytochrome c biogenesis protein CCS1, chloroplastic-like] [protein_id=XP_016480773.1] [location=complement(join(88734..88925,89023..89106,89197..89353,89544..89812,90201..90473,90995..91106,91199..91418,93131..93560))] [gbkey=CDS]
Sequence

ATGGAGACTCTAAAGATTTCAACTAAACCAACAATGTCACATATACAAAACCAAATTCAT
CCCTTGAATCTCAAACCCTATCCCCTTATCCACAATTCTCGAATTCTTGGTGTGTACAAC
AACAAAGGTGGCCGCACTTTTTCCTTTACTCTTACATGTAAGCTCAAAGTCAAAACAGTT
AAAGGAACTAAAACCAACAATGAAAAAAGCGTTTCTGGTCAGATTACAGTGCCTGATTCT
GATAGTGCGCCGCCAATTATTGAAGCAGAAGAAGGGTCTATAGGAAATGGTGAAAAGAAA
ATGGAGCAGAAAAATAGTGTTTCTGGTTCAGGACTGTTCAAGAAATTGCCTAGAAAAGTT
TTGGGAATTTTGTCCAATTTGCCTTTGGCTATTGCTGAGATGTTTGCTGTTGCTGGGTTA
ATGGCCTTAGGAACGTTCATTGACCAAGGCGAGGCACCTGATTACTACTTTCAAAAGTTT
CCCGACGATCATCCTTTCCTGGGTTTTTTCTCTTGGAGATGGGTTCTCACCCTCGGCTTT
GATCATATGTTCTCATCACCGGTATTCTTAGGAACATTGACTCTACTGGGAGCATCATTG
ATGGCTTGCACATACACAACACAGATTCCCCTAGTGAAGGTAGCAAGAAGATGGTCTTTC
TTAAACTCAGCAGAGACAATCCGTAAGCAAGAATATGCAGACACTCTGCCTAGGGCATCA
GTTAAAGACTTGGGTGTTATACTGATGGGAGATGGATTTGAGGTATTCTCGAAAGGGCCA
GCTCTGTATGCATTTAAAGGGTTGGCAGGTAGATTCGCTCCAATTGGCGTCCATTTATCA
CTGCTGCTTGTAATGTCTGGAGGAACACTTAGTGCAACCGGGAGCTTTCGAGGGGCTGTA
ACTGTTCCACAAGGTTTAAATTTTGTCGCGGGTGATGTACTTTCACCATCTGGGTTTCTA
TCCACTCCTTCCGATGCTTTCAGTACAGAGATTCATGTCAATCGATTCTCCATGGACTAC
TATGACAGTGGGGAGGTCTCACAGTTCCATACTGATCTTTCACTATATGACCTTAATGGA
AAGGAAGTAATGAGGAAGACTATAAGTGTCAATGATCCCTTAAGGTACGGGGGAATCACT
ATATACCAAACAGATTGGAGTATATCAGCGCTACAAGTACTGAAGGATGGTGAAGGTCCT
TTTAATTTGGCTATGGCACCACTGCAAATGAATGGGGGTGACAAGAAGCTCTTTGGTACT
TTCCTACCAGTCGAAGATGGTGATTCGCCCAATGTTAAGGGAATATCAATGCTAGCACGT
GATTTGCAGTCAGTTATTCTTTATGATAAACAAGGAAAATTTGCGGGAGTCAGACGACCT
AATTCCAAGCTTCCAATTGAGATTGACGGAACAAAAATTGTTATTGTTGATGCGATTGGC
AGTAGTGGCCTTGATCTAAAGACTGATCCAGGAGTACCTGTTGTCTATGCTGGTTTCGGT
GCTCTAATGCTTACAACTTGCATCAGTTATTTATCTCATACACAGCTATGGGCCTTACAA
GATGGAACATCGGTGGTGGTTGGGGGTAAGACCAACCGGGCCAAGGGTGAGTTTCCTGAT
GCAATCAATCGTTTGCTCGATCAAGTCCCTGAATTAGTGGAAACATCTTCTCCCAAGGAA
TCTGACAGTCTCGTGGCTTCTAAGTTGGAGTTGGAACGAACGGGACTTGATGTTTAA

Peptide Sequence

PEP ID

XP_016480773.1
PEP Infomation

PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic-like [Nicotiana tabacum]
Sequence

METLKISTKPTMSHIQNQIHPLNLKPYPLIHNSRILGVYNNKGGRTFSFTLTCKLKVKTV
KGTKTNNEKSVSGQITVPDSDSAPPIIEAEEGSIGNGEKKMEQKNSVSGSGLFKKLPRKV
LGILSNLPLAIAEMFAVAGLMALGTFIDQGEAPDYYFQKFPDDHPFLGFFSWRWVLTLGF
DHMFSSPVFLGTLTLLGASLMACTYTTQIPLVKVARRWSFLNSAETIRKQEYADTLPRAS
VKDLGVILMGDGFEVFSKGPALYAFKGLAGRFAPIGVHLSLLLVMSGGTLSATGSFRGAV
TVPQGLNFVAGDVLSPSGFLSTPSDAFSTEIHVNRFSMDYYDSGEVSQFHTDLSLYDLNG
KEVMRKTISVNDPLRYGGITIYQTDWSISALQVLKDGEGPFNLAMAPLQMNGGDKKLFGT
FLPVEDGDSPNVKGISMLARDLQSVILYDKQGKFAGVRRPNSKLPIEIDGTKIVIVDAIG
SSGLDLKTDPGVPVVYAGFGALMLTTCISYLSHTQLWALQDGTSVVVGGKTNRAKGEFPD
AINRLLDQVPELVETSSPKESDSLVASKLELERTGLDV

Transcript Sequence

Gene sequence data has not been registered.